Study on the metabolic potential of six ancient bacterial lineages in deep-sea sediments using MAGs macrogene assembly method
AD |
//CR(MAGs)6(Lokiarchaeota, Thorarchaeota, Heimdallarchaeota, Bathyarcheota, ThermoplasmatalesHadesarchaea)31magLokiarchaeotaBathyarchaeotamagCRLokiarchaeotaLokiarchaeotaWood-LjungdahlcomarchaeotaarchaeotaCR31(MAGs)6(Lokiarchaeota, Thorarchaeota, Heimdallarchaeota, Bathyarcheota, ThermoplasmatalesHadesarchaea)LokiarchaeotaBathyarchaeotaMAGsLokiarchaeotaDNAIQ-Tree16(L2L3L4L5L6L14L15L16L18L22L24S3S8S10S17S19)(VT + F + R10) 1000HMMsearchHMMMAGsBlastKoalKEGGUSEARCH-ublastMEROPSbinKEGG,CR Lokiarchaeota(rG)pH81mmCRU1378U1379CR Lokiarchaeota:G0rRCHNOSZ(4C)Qr16S rRNACR5,12616S rRNA(3125%)archaeotaLokiarchaeota531mag11(60%5%)magNCBI (nr)MAG(60-75%)CR_1215%Heimdallarchaeota16MAGs6Lokiarchaeota, Thorarchaeota, Heimdallarchaeota, Bathyarcheota, ThermoplasmatalesHadesarchaeaCRMAGs(ESPs)espCRHeimdallarchaeotaLokiarchaeota MAGs (CR_06, CR_11)ESPsCRarchaeota, HadesarchaeotaThermoplasmata MAGsespMCR(mcrABCDG)CRMCRHMMmag(AssA)(BssA)C-CLokiarchaeota CR_06Lokiarchaeota CR_06BCRBBzd4(BzdONPQ)BCRiCR_06BCR(LokiarchaeotaBathyarchaeotaArchaeoglobus)BCRPQATP/ATP[4Fe-4S]a(ON)aaCR_06BCR4(CR_06-contig-100_3495)CR_06 MAG(= 1110)> 200xCR_ Lokiarchaeota (CR_06)CRAsgardAsgard MAGs(CR_06, 07, 08, 1112)CO2H2OrG '(rG ' = 196.3 [kJ/mol])CR(86%)Lokiarchaetoa():(a)CO2H2O(rG ' =1206
/
/
CR(MAGs)
6(Lokiarchaeota, Thorarchaeota, Heimdallarchaeota, Bathyarcheota, ThermoplasmatalesHadesarchaea)31magLokiarchaeotaBathyarchaeotamag
CR
LokiarchaeotaLokiarchaeota
Wood-Ljungdahlcom
archaeota
archaeota
CR
31(MAGs)6(Lokiarchaeota, Thorarchaeota, Heimdallarchaeota, Bathyarcheota, ThermoplasmatalesHadesarchaea)
LokiarchaeotaBathyarchaeotaMAGsLokiarchaeota
DNA
IQ-Tree16(L2L3L4L5L6L14L15L16L18L22L24S3S8S10S17S19)
(VT + F + R10) 1000
HMMsearchHMMMAGs
BlastKoalKEGG
USEARCH-ublastMEROPSbin
KEGG,
CR Lokiarchaeota(rG)pH81mm
CRU1378U1379CR Lokiarchaeota
:
G0rRCHNOSZ(4C)
Qr
16S rRNA
CR5
,12616S rRNA
(3125%)archaeotaLokiarchaeota
531mag11(60%5%)mag
NCBI (nr)
MAG(60-75%)CR_1215%Heimdallarchaeota
16MAGs6Lokiarchaeota, Thorarchaeota, Heimdallarchaeota, Bathyarcheota, ThermoplasmatalesHadesarchaea
CRMAGs(ESPs)esp
CRHeimdallarchaeotaLokiarchaeota MAGs (CR_06, CR_11)ESPs
CRarchaeota, HadesarchaeotaThermoplasmata MAGsesp
MCR(mcrABCDG)CRMCR
HMMmag
(AssA)(BssA)C-C
Lokiarchaeota CR_06Lokiarchaeota CR_06BCRBBzd4(BzdONPQ)
BCRiCR_06BCR(LokiarchaeotaBathyarchaeotaArchaeoglobus)BCR
PQATP/ATP[4Fe-4S]
a(ON)aa
CR_06BCR4(CR_06-contig-100_3495)
CR_06 MAG(= 1110)> 200x
CR_ Lokiarchaeota (CR_06)CRAsgard
Asgard MAGs(CR_06, 07, 08, 1112)CO2H2O
rG '(rG ' = 196.3 [kJ/mol])CR
(86%)
Lokiarchaetoa
():
(a)CO2H2O(rG ' =1206.3 [kJ/mol]);
(b)CO2H2O(rG ' =373.6 [kJ/mol]);
(c)CO2H2O(rG ' = - 119.9 [kJ/mol])
Lokiarchaeota
[NiFe]3b3dNADH+NADPH+H2Asgard
(IV)()CR_06
CR_14MCR(mcrABCDG)
CR_144()(TMAO/DMSO)n -(TMAO)
corcoroidCoB - CoM/F420(hdrABCDmvhADG)CR_14M (CoM)B (CoB)CoM- sh
s -(mtrA- h)mtrACoM5,6,7,8-(H4MPT)CODH/ACSaWood-Ljungdahl
CR_14MAG
archaeota CR_14archaeota
a(AcsB)CR_14 AcsBAsgardChloroflexiAltiarchaeales
AltiarchaealesAcsB
ChloroflexiACSarchaeotaAsgardAltiarchaealesACS
ACSarchaeotaACS(CoM, H4MPT)aarchaeota
CRMAGsESPESPs
archaeotaLokiarchaeotamag
(Aminicenantes, TA06, Aerophobetes, Atribacteria, HelarchaeotaBathyarchaeota)
CR_Asgard/CR_Lokiarchaeota/atpBCR(Bzd)
Lokiarchaeota()
531mag(Lokiarchaeota, Thorarchaeota, Heimdallarchaeota, Bathyarcheota, ThermoplasmatalesHadesarchaea)
11mag(>60%<10%)
90%archaeotaAsgardMAGMAG
()
Lokiarchaeota
Lokiarchaeota
archaeota
CR
mag
CRMAGs
()Wood-Ljungdahl
CR
[1]
[2]
[3]
[4]
[5]
[6]
[7]Muhammad Zohaib Nawazsmall RNA
Disclaimer: The content of this article is sourced from the internet. The copyright of the text, images, and other materials belongs to the original author. The platform reprints the materials for the purpose of conveying more information. The content of the article is for reference and learning only, and should not be used for commercial purposes. If it infringes on your legitimate rights and interests, please contact us promptly and we will handle it as soon as possible! We respect copyright and are committed to protecting it. Thank you for sharing.(Email:[email protected])
Mobile advertising space rental |
Tag: Study on the metabolic potential of six ancient bacterial
666 self media are banned for life, we must take this as a warning!
NextIt's not just cloud costs that are out of control: burning 450 million yuan a year for observability
Guess you like
-
Youku's "Transformers" Film Production Vehicle: Entering Rainforests, Crossing Deserts, Creating a New Efficient Shooting Model for Film CrewsDetail
2024-09-21 18:33:55 1
- Detail
-
Apple iPhone 16 and Huawei Mate XT Tri-fold Phones Released on the Same Day: Who Will Win in a "Godly Battle" in Changsha Offline Stores?Detail
2024-09-21 16:18:55 1
- Detail
-
Has Your Personal Information Been Leaked? The Truth Behind Nuisance Calls and How to Protect YourselfDetail
2024-09-20 19:58:58 11
- Detail
-
iPhone 16 Debuts! Tmall Flagship Store's "More for the Same Price" Campaign Sparks Another Buying FrenzyDetail
2024-09-20 16:00:18 11
- Detail
- Detail
- Detail
-
Huawei's Tri-Fold Phone Gets "Bad Reviews": Chen Zhen Reviews with a Xiaomi Foldable and Says it's "Cool but I Probably Won't Use It Long-Term"Detail
2024-09-19 11:37:20 1
-
Python 3 Journey: 10 Lesser-Known Tips and Best Practices to Become a Better DeveloperDetail
2024-09-18 19:35:06 1
- Detail
- Detail
-
Is Buying a Phone Online Really Cheaper? A Physical Store Owner Reveals the "Inside Scoop": Stop Being Tricked!Detail
2024-09-18 16:46:11 1
- Detail
-
From a Stranger's Number to a Soul Mate: My Mobile Number "Inheritance" JourneyDetail
2024-09-16 03:06:20 11
-
Reproduction Under Weightlessness: How Can Humanity Perpetuate Civilization in Space?Detail
2024-09-15 23:18:12 11
- Detail
- Detail